This python code is a pipeline that can unzip fastq files and call tophat (https://ccb.jhu.edu/software/tophat/index.shtml), cufflinks (http://cole-trapnell-lab ...
This tutorial assumes that the plotly user credentials have already been configured as stated on the getting started guide. Removed dependecies on ta-lib. This library is no longer required. All ...
It is likely you will need to install the plotly and cufflinks packages. A quick online search will show you how to do this for your system.
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